CDS
Accession Number | TCMCG041C18889 |
gbkey | CDS |
Protein Id | XP_010265189.1 |
Location | complement(join(2050539..2050634,2052731..2052939,2063317..2063358,2063524..2063684,2063770..2063841,2064003..2064184,2072842..2072965,2073332..2073396,2073741..2073952,2074073..2074304,2085475..2085558,2085646..2085703,2096013..2096060,2106608..2106765,2107292..2107342,2107427..2107500,2107633..2107708,2110236..2110280,2110364..2110427,2110607..2110736,2110859..2111054,2111302..2111385,2111488..2111542,2113143..2113363,2117813..2117926,2118145..2118208,2143573..2143673,2143804..2143907,2145202..2145399,2146797..2146890,2165250..2165423)) |
Gene | LOC104602996 |
GeneID | 104602996 |
Organism | Nelumbo nucifera |
Protein
Length | 1195aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA264089 |
db_source | XM_010266887.1 |
Definition | PREDICTED: DENN domain and WD repeat-containing protein SCD1 isoform X2 [Nelumbo nucifera] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGACTCGGATCTTCGAGTACTTTGTTGTTTGCGGGATCGGTCCAGAGATCTCAACGCTCGATGGTAACAAAGGATACCATGGAACAGGGGTCATGTACTTACCTTCCGTGCTCGATCAATACCCTCCTTCCAATAACGCGCTCTACCCTCCCCCGCCCCCTCAGCTTTCCACTTGTGTTCTTCCAGCTGGTGTGGAGTTCTATTCATCAGGGCTCAATCCTAATGATGCCTCAACATTCCCGAAGAGCTATCCAATAGTTTTAACAGAGGGTGATGGATCTAAAATATATGTTAGCTGCATTGCTTTTCGGGATCCAGTCTGTGATGATATAGCTGAAGCTTACCGCATTCCCGCAAATTCTTTTGCTGACAAGTGCATTTGTCTTGTTTCACGCTCACCCAGTTTTCGTGTTCTTCGGGATGCACTGGAGGAATTATTTGCTCTTTGCTTTTCTCCTGATGGCAGCGTTCCTTTGCCTACTCCTGGAAAGGATCGAGTCCTTTTTGCTATTGAGAACTGCCTGCTTTCTGTGGAGGCTCCAACAAAGGACGGACTCCCATATGCTGATATATCTTTTCAGCCACTAGTACAGTGCTTGGATGTTGATAACTTGATTACGCTTTTCACTGCAGTGTTGCTTGAGAGAAGGATTTTGCTCCGCTCAAACAAGTATTCACTATTAACACTTGTATCAGAAGCTATCTGCCATTTAATTTATCCATTCAGGTGGCAGCATGTCTATATTCCATTGTTATTTTTCAATGGAGTTGACTACATTGATGCTCCTACACCATACATGATGGGTCTCCATTCAGGTGTTGACACATCTGGTCTGGCTATGGATGGTGTGGTTGTTGTAGACCTTGAATATAACCGTATTACTACATCAGAAGAAATACCTCCTATACCAGAGCCAGAATTAAGTTCTTTGCGTGGTGAGATAATGAAATTGTTGTATCCAAAAGTTGTTGGAATAGATCAAATGAAGACAAGCTTTGGTGTTTCATCTGAACAATATCCTAAAAGTGCAAACAAGCCTTGGGGAGAGGAACATGATCTTCAACTTAGATTAATATTCCTAAAATTCTTTGCATCAATTTTGAGTGGCTACCGTAATTTCATAGAAAATAGTGCTACTCAGGTCTTCAACACACAAGCATTTTTGAAGAAACGATCTAGGTCAACAAACCAACCACCAGAACCCATGATCGAACAGTTTTTAGATTCTCAAGGTTTCTTGGATTATTTGGAGAGGGGTATAGGTTCAGATGAAAATTCTAACAATCTTCTTGACAAGTTACAAGATGCTATTGGAAGAGGTCAAAATCCTATGTCGATTCTTCCCTGTCTTATGGAAGAGCCTGAGGTTATAACCATATCTGACCATGGTGTTGGAATTGCAGGATCAGGTGCCAAATATTGTTATGACAGGTTTCCATCAAATGTTAGGACAGAAGAACAAGAAGAAAGGAGAAATGCCATTATTGCAGCAGCAAGTGGAGCATTGGAGTATTCAGGAAGGCATATGCCTAGCTCACCTTCTATGCTAGTTGGTAAGGACTCAAAAGCAGAAAGTCTAAGTCCAAGGGAGAGGGCGGCAGAAAGAGAGCGAATGGTCCTGGACATAAAAGTGAAGCTTCAGGGACTGTGGTTACGTCTTTTGAAATTGGGAGCAACTGATGATCCTCTTTCATCATTTGAATATGGCACAATTCTTGCTTTAATTGAGTCTGATGCAGAGGGAATTGGAGGCAGTGGTTTTGTTGAGTGTATAAGGGAACACATTCATTCAGGATGGGCCTGTCGTTTGACCGAAGAGCAGTTTGTTGCAGTTAAAGAATTGCTCAAAACAGCAATCAGTCGTGCCACCTCTCGGAATGACATGTCGACCATAAGAGATGCACTCGAAGTTTCTGCAGAGATGTATAAAAAAGATTCTAATAATGTTCCAGATTATGTTCAACGTCATCTCCTTTCTCTATCCATCTGGGAGGAACTACGATTTTGGGAAGGCTACTTTGAGTATTTAATGGATCAGTCTTCAAATAAGATGTCTAATTATGTCATTCTTGTGACGGCACAGCTAATTATAGTGGCATCACATATGGCTGGGTTAGGAATTCCTGATACTGATGCTTGGTATATCATTGAGACTATTGCAAACAAAAACAACATTGGATATAAGCAATTTATAAAACTCCGGGGATTGTTGTCCCATATCCAACAACTACGGATTGGTTACTGGGGAATCTCATCTGTGAAGATCCAGTCTGTCTCACCCTATGGATTGCCATCTCCACGCCTTCAAGATGCAGCAGATGAAAGTCAGCAACCTGCTGAAGCTTCTGGTGTTGGACGAAGCTGGGTGCAGAGCATGTTTAGCAGGGACACAACATCAAGAGCTAACTCTTTCAGTCGTGCTCCTGTAAATGAAAGCACAAAAAATACTGCTTCTCCCCGCAAGGCAGATTTACCAGCTGCTGGACAGAAGAAAACTCAGTCAAGTATGCGGATACTTAGGGGTCATAACGGTGCTGTTACTGCTCTACACTGTGTAACAAGAAGAGAAGTGTGGGATCTGGTGGGTGATCGTGAAGATGCTGGTTTTTTTATAAGCGGGAGCACTGACTGCACGGTTAAGATCTGGGATCCTAGTCTTCGTGGCTCTGAACTACGGGCAACCTTGAAAGGACATACAGGGGCTGTTCGTGCAATTAGCTCTGACCGAGGGAAGGTGGTATCTGGCTCTGATGATCAGTCTATCATTGTCTGGGATAAACAAACAACTCAACTTCTAGAAGAGCTGAAAGGCCACGATGGGCAGGTTAGCTGTGTGCGCATGTTGTCAGGGGAGCGTGTCCTTACTGCTTCCCATGATGGCAGTGTAAAGATGTGGGATGTGAGGACAGATACTTGTGTGGCAACAGTTGGCCGTTGTTCTAGTGCAGTTATTTGTATGGAATATGATGACTCTACAGGAATCTTGGCTGCTGGTGGTAGAGATGCGGTTGCAAATATTTGGGACATCCGTGCTGGTAGGCAGATGCACAAACTTTTAGGTCACACAAGATGGATCCGGTCATTGAGGATGGTTGGTGACACTATTATTACTGGTAGTGATGACTGGACATCTAGAATATGGTCTGTTTCTCGAGGAACATGTGATGCTGTTCTAGCATGTCATGCTGGTCCAGTTCTCTGTGTTGAGTACTCAATTCCAGACAAGGGAATAATAACTGGTTCAACTGATGGGCTGCTCCGTTTTTGGGAAAACGAGGATGGAGGAATAAAATGTGTTAAGAATGTTACTATTCATTCTTCTTCTATTTTATCTATCAATGCTGGAGAGCATTGGTTAGGTATTGGAGCAGCAGATAATTCCATGTCTCTCTTCCATCGGCCTCAAGAAAGGTTTGGGGGCTTCTCTGGTGCAGGATCAAAAGTTCCTGGGTGGCAACTGTACAGAACTCCACAGAGAACAGTTGCTTTGGTACGCTGTGTGGTTTCGGACCTTGAACGGAAAAGGATATGCAGTGGTGGTCGTAATGGACTTCTCCGGCTGTGGGAAGCCACCATCAATATCTAG |
Protein: MTRIFEYFVVCGIGPEISTLDGNKGYHGTGVMYLPSVLDQYPPSNNALYPPPPPQLSTCVLPAGVEFYSSGLNPNDASTFPKSYPIVLTEGDGSKIYVSCIAFRDPVCDDIAEAYRIPANSFADKCICLVSRSPSFRVLRDALEELFALCFSPDGSVPLPTPGKDRVLFAIENCLLSVEAPTKDGLPYADISFQPLVQCLDVDNLITLFTAVLLERRILLRSNKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFNGVDYIDAPTPYMMGLHSGVDTSGLAMDGVVVVDLEYNRITTSEEIPPIPEPELSSLRGEIMKLLYPKVVGIDQMKTSFGVSSEQYPKSANKPWGEEHDLQLRLIFLKFFASILSGYRNFIENSATQVFNTQAFLKKRSRSTNQPPEPMIEQFLDSQGFLDYLERGIGSDENSNNLLDKLQDAIGRGQNPMSILPCLMEEPEVITISDHGVGIAGSGAKYCYDRFPSNVRTEEQEERRNAIIAAASGALEYSGRHMPSSPSMLVGKDSKAESLSPRERAAERERMVLDIKVKLQGLWLRLLKLGATDDPLSSFEYGTILALIESDAEGIGGSGFVECIREHIHSGWACRLTEEQFVAVKELLKTAISRATSRNDMSTIRDALEVSAEMYKKDSNNVPDYVQRHLLSLSIWEELRFWEGYFEYLMDQSSNKMSNYVILVTAQLIIVASHMAGLGIPDTDAWYIIETIANKNNIGYKQFIKLRGLLSHIQQLRIGYWGISSVKIQSVSPYGLPSPRLQDAADESQQPAEASGVGRSWVQSMFSRDTTSRANSFSRAPVNESTKNTASPRKADLPAAGQKKTQSSMRILRGHNGAVTALHCVTRREVWDLVGDREDAGFFISGSTDCTVKIWDPSLRGSELRATLKGHTGAVRAISSDRGKVVSGSDDQSIIVWDKQTTQLLEELKGHDGQVSCVRMLSGERVLTASHDGSVKMWDVRTDTCVATVGRCSSAVICMEYDDSTGILAAGGRDAVANIWDIRAGRQMHKLLGHTRWIRSLRMVGDTIITGSDDWTSRIWSVSRGTCDAVLACHAGPVLCVEYSIPDKGIITGSTDGLLRFWENEDGGIKCVKNVTIHSSSILSINAGEHWLGIGAADNSMSLFHRPQERFGGFSGAGSKVPGWQLYRTPQRTVALVRCVVSDLERKRICSGGRNGLLRLWEATINI |